BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C06SP1|AL427596
(598 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1571 1000 0.0
>3x_Contig1571
Length = 13536
Score = 1000 bits (497), Expect = 0.0
Identities = 571/600 (95%), Gaps = 3/600 (0%)
Strand = Plus / Minus
Query: 1 acacaccaggkgggtccacattcttatgtattctcatttcttttttgaagatgttttctc 60
|||||||||| |||||||||| |||| || | | || | |||||||||||||||||||||
Sbjct: 10630 acacaccaggtgggtccacatccttaagtctgcccaatccttttttgaagatgttttctc 10571
Query: 61 aggacttctaaacggttccctccataccggcacatgaaggcaaccwattccaaaawgtca 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 10570 aggacttctaaacggttccctccataccggcacatgaaggcaacctattccaaaatgtca 10511
Query: 121 atggtctataaaaraaacmaaacatgtacacccctgtaccaatacwttactccaagatta 180
|| |||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||
Sbjct: 10510 attgtctataaaataaaccatacatgtacacccctgtaccaatactttactccaagatta 10451
Query: 181 twggtattacwacaacaagtacwaagattaaccatcaatdttattctggaggatgaacta 240
| |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 10450 ttggtattactacaacaagtactaagattaaccatcaattttattctggaggatgaacta 10391
Query: 241 tttttkagtctctcttgttcttatcccgtaagaacattccagagaatagaaaaakaaana 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 10390 ttttttagtctctcttgttcttatcccgtaagaacattccagagaatagaaaaataatta 10331
Query: 301 aaagggtttgaaccttttcaggcaagttttatcataatgtgaatcagggttctgcgtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10330 aaagggtttgaaccttttcaggcaagttttatcataatgtgaatcagggttctgcgtcaa 10271
Query: 361 ttggaaatccaacatagcattgactgctaatgtaaga-ttccaccgattgctttgaggtc 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10270 ttggaaatccaacatagcattgactgctaatgtaagatttccaccgattgctttgaggtc 10211
Query: 420 catttcccatttcctgcagtcccttcgttcgaagatttagcgaatgttcgttaccgagcc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10210 catttcccatttcctgcagtcccttcgttcgaagatttagcgaatgttcgttaccgagca 10151
Query: 480 aaagtttcatgggatggctataaaatatggctatactgtgtatttcgttagaaggagaac 539
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10150 aaagtttcat-ggatggctataaaatatggctatactgtgtatttcgttagaaggagaac 10092
Query: 540 aagcggtgctacaaagttgaatgggtaagcgawgatcgcttac-ccatttaaccattttt 598
|||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||
Sbjct: 10091 aagcggtgctacaaagttgaatgggtaagcgatgatcgcttactccattcaaccattttt 10032
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3246
Number of Sequences: 1807
Number of extensions: 3246
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 598
length of database: 10,358,551
effective HSP length: 16
effective length of query: 582
effective length of database: 10,329,639
effective search space: 6011849898
effective search space used: 6011849898
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)